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MAPT haplotype association Using the imputed NeuroChip genotyping data, we selected rs1800547 to differentiate the MAPT H1 and H2 haplotypes and six tagging variants (rs1467967, rs242557, rs3785883, rs2471738, rs8070723, and rs7521) to define the H1 specific sub-haplotypes ( MAPT haplotypes genotypic and allelic frequency in cases and controls was tested using the Chi-squared and Fisher’s exact tests, respectively
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